Welcome to the documentation for HAMLET

This is currently a placeholder. You can see the full documentation on the HAMLET github page.

Contents

• qc-seq
  • Tools
  • Input
  • Output
  • Configuration
    • Example
    • Configuration options
• snv-indels
  • Tools
  • Input
  • Output
  • Configuration
    • Example
    • Configuration options
• fusion
  • Tools
  • Input
  • Output
  • Configuration
    • Example
    • Configuration options
• itd
  • Tools
  • Input
  • Output
  • Configuration
    • Configuration options
• expression
  • Tools
  • Input
  • Output
  • Configuration
    • Example
    • Configuration options
• Changelog
  • v2.1.3
  • v2.1.2
  • v2.1.1
    • Bugfixes
  • v2.1.0
    • Breaking changes
    • Changes
    • Bugfixes
    • Updates
  • v2.0.5
  • v2.0.4
  • v2.0.3
    • Bugfixes
  • v2.0.2
  • v2.0.1
    • Bugfixes
  • v2.0.0
    • Bugfixes
    • Tool changes
    • Tool updates
    • Speed improvements
    • Changes